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prismpyp intersect

Purpose

Compute the intersection of micrograph embeddings between images with high-quality features in the real domain and images with high-quality features in the Fourier domain.

This command outputs images with high-quality features in both domains, with the aim of reducing false positive rates.

Usage

usage: prismpyp upload_nextpyp [-h] 
                               [--intersection-folder INTERSECTION_FOLDER]
                               [--link-type {hard,soft}]
                               [--mrc-path MRC_PATH]

Named Arguments

Argument Description Default
--intersection-folder INTERSECTION_FOLDER Path to intersection folder earlier results were saved
--link-type {hard,soft} Type of filesystem link to create for intersected micrographs (hard or soft)
--mrc-path MRC_PATH Path to directory containing the original .mrc files